SpectroMine™ expands the possibilities for researchers in shotgun proteomics:
- DIA, DDA and PRM Searchable: Increased versatility with the opportunity to search multiple data acquisition formats.
Scalability to 1’000s of Runs: Memory-efficient data handling enables concurrent processing of >1’000 of MS runs.
Accurate Statistics: FDR control on PSM, peptide, and protein level. - Differential Abundance Analysis: Detect previously undetectable information contrasting different biological or medical conditions.
GO Support: Link your protein identifications to gene ontology annotations. - All-In-One Workflow: With integrated quality control, spectra, and post-analysis visualization.
Isobaric Labeling Quantification: Compatible with Tandem Mass Tags (TMT), iTRAQ and EASI-tag reagents.
Supported Instruments
- Thermo Scientific™ Orbitrap Exploris™ 480
- Thermo Scientific™ Q Exactive™ Series
- Thermo Scientific™ Orbitrap Fusion™ Series
- SCIEX TripleTOF® Series (5600, 5600+, 6600)
- Bruker Impact II and timsTOF™ and timsTOF™ Pro
- Waters Xevo® G2-XS QToF , Synapt G2-Si
Supported Methods and Workflows
- SpectroMine™ can search DDA, DIA, and PRM with MS1 information.
- SpectroMine™ can search and quantify DDA runs from isobaric-labeled experiments using labels such as TMT, EASI-tag, and iTRAQ.
- MS2 and SPS-MS3 methods are supported. All ion trap resolutions are supported. SpectroMine™ supports neutral loss-based fragmentation label methods (such as EASI-tag).
Recommended System Requirements
- Windows 10 x64
- Intel or AMD CPU with 4 cores or more
- 2 TB of hard drive space or more (2x data set size)
- 16 GB of memory space or more
If you are interested in ordering one of our softwares, please submit a request form or contact us. Our team will review your inquiry and get back to you within 5 working days.
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