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Immunopeptidomics Data Analysis: Challenges, Advances, and Applications

As immunotherapies become increasingly sophisticated, researchers need reliable ways to understand how drugs influence antigen presentation and immune recognition. Immunopeptidomics enables this level of insight and is a valuable tool for connecting molecular drug effects with biological and clinical outcomes.

However, generating robust immunopeptidomics data often requires large amounts of input material, which can be limiting in both preclinical models and clinical samples.